convenience_scripts#

PATATO command line interfaces#

A series of convenience scripts for running the patato package in the command line.

Modules

`convert_binary_to_hdf5`	`patato-import-ithera`: A script to convert iThera MSOT Data into the PATATO hdf5 format.
`convert_simpa`	`patato-convert-simpa`: A script to convert simpa HDF5 output into the PATATO hdf5 format.
`copy_rois`
`data_analysis`
`generate_core`
`import_clinical_data`
`import_ithera_recons`
`print_speeds`
`process_msot`	`patato-reconstruct`: A script to reconstruct all MSOT data files in a folder.
`rename_scan`
`scan_status`
`split_rois`
`unmix`	`patato-unmix` is a command line tool for unmixing MSOT data.
`view`